Genetics. Published Articles Ahead of Print: May 27, 2008, Copyright © 2008
doi:10.1534/genetics.108.087122


A more recent version of this article appeared on June 1, 2008.


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The distribution of beneficial and fixed mutation fitness effects close to an optimum

1 Centre d'Ecologie Fonctionnelle et Evolutive CNRS

* To whom correspondence should be addressed. E-mail: guillaume.martin{at}cefe.cnrs.fr.

Submitted on January 18, 2008
Revised on February 21, 2008
Accepted on 18 March 2008


Abstract

The distribution of the selection coefficients of beneficial mutations is pivotal to study the adaptive process, both at the organismal level (theories of adaptation) and at the gene level (molecular evolution). A now famous result of extreme value theory states that this distribution is an exponential, at least when considering a well adapted wild-type. However, this prediction could be inaccurate under selection for an optimum (because fitness effect distributions have a finite right tail in this case). In this paper, we derive the distribution of beneficial mutation effects under a general model of stabilizing selection, with arbitrary selective and mutational covariance between a finite set of traits. We assume a well adapted wild-type, thus taking advantage of the robustness of tail behaviors, as in extreme value theory. We show that, under these general conditions, both beneficial mutation effects and fixed effects (mutations escaping drift loss) are Beta distributed. In both cases, the parameters have explicit biological meaning, and are empirically measurable; their variation through time can also be predicted. We retrieve the classic exponential distribution as a sub-case of the Beta when there is a moderate to large number of weakly correlated traits under selection. In this case too, we provide an explicit biological interpretation of the parameters of the distribution. We show by simulations that these conclusions are fairly robust to a lower adaptation of the wild-type, and discuss the relevance of our findings in the context of adaptation theories and experimental evolution.

Key Words: adaptation, beneficial mutation effects, fisher model, mutational landscape, quadratic forms




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P. Joyce, D. R. Rokyta, C. J. Beisel, and H. A. Orr
A General Extreme Value Theory Model for the Adaptation of DNA Sequences Under Strong Selection and Weak Mutation
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