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Cysteine Repeat Domains and Adjacent Sequences Determine Distinct Bone Morphogenetic Protein Modulatory Activities of the Drosophila Sog Protein
Kweon Yua,b, Kyung-Hwa Kanga, Petra Heinea, Ujwal Pyatic, Shaila Srinivasana,d, Brian Biehsa,e, David Kimelmanc, and Ethan Bieraa Section of Cell and Developmental Biology and Center for Molecular Genetics, University of California, San Diego, California 92093-0349,
b Laboratory of Development and Differentiation, Korea Research Institute of Bioscience and Biotechnology, Yusong-gu, Daejon, 305-333, Korea,
c Department of Biochemistry, University of Washington, Seattle, Washington 98195-7530,
d University of Illinois, Chicago, Illinois 60607
e University of California, San Francisco, California 94143-0448
Corresponding author: Ethan Bier, University of California, San Diego, California 92093-0349., bier{at}biomail.ucsd.edu (E-mail)
Communicating editor: D. WEIGEL
| ABSTRACT |
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The Drosophila short gastrulation gene (sog) encodes a large extracellular protein (Sog) that inhibits signaling by BMP-related ligands. Sog and its vertebrate counterpart Chordin contain four copies of a cysteine repeat (CR) motif defined by 10 cysteine residues spaced in a fixed pattern and a tryptophan residue situated between the first two cysteines. Here we present a structure-function analysis of the CR repeats in Sog, using a series of deletion and point mutation constructs, as well as constructs in which CR domains have been swapped. This analysis indicates that the CR domains are individually dispensable for Sog function but that they are not interchangeable. These studies reveal three different types of Sog activity: intact Sog, which inhibits signaling mediated by the ligand Glass bottom boat (Gbb), a more broadly active class of BMP antagonist referred to as Supersog, and a newly identified activity, which may promote rather than inhibit BMP signaling. Analysis of the activities of CR swap constructs indicates that the CR domains are required for full activity of the various forms of Sog but that the type of Sog activity is determined primarily by surrounding protein sequences. Cumulatively, our analysis suggests that CR domains interact physically with adjacent protein sequences to create forms of Sog with distinct BMP modulatory activities.
SIGNALING mediated by the bone morphogenetic protein (BMP) pathway is required for a variety of cell fate choices during development and is regulated at many steps in the signaling cascade (reviewed in ![]()
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Sog and Chordin are large molecules that each contain four copies of a cysteine repeat (CR) domain consisting of
70 amino acids defined by a fixed spacing of 10 cysteine residues and an invariant tryptophan residue between the first two cysteines (![]()
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Two extracellular regulators of Sog activity have been characterized. The first is a metalloprotease encoded by the tolloid (tld) gene. Null loss-of-function tld mutants exhibit defects similar to those of moderate decapentaplegic (dpp) loss-of-function mutants (![]()
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Recombinant forms of Sog truncated within the stem region, referred to as Supersog, have a broadened BMP inhibitory activity in comparison to intact Sog (![]()
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A variety of evidence suggests that Tsg is involved in generating a Supersog-like activity during development. First, coexpression of Sog and Tsg results in a Supersog-like phenotype in the wing, whereas misexpression of these genes individually results in mild opposing phenotypes (![]()
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In this article, we present a systematic structure-function study of Sog from which we extract the following major conclusions. First, we find that the individual CRs serve partially redundant functions. For example, an internally deleted form of Sog lacking all but the CR4 domain (SogCR4) retains significant Sog-like activity. This finding is consistent with a functional analysis of Chordin in which overlapping activities of the CR1 and CR3 domains were reported (![]()
CR4) or both CR3 and CR4 (SogCR1,2), exert activities that are distinct from those of Sog or Supersog. These Sog
CR4 and SogCR1,2 activities are similar to those resulting from activation of Gbb
Sax signaling. Finally, we examine whether the CR domains determine the distinct activities of various forms of Sog by performing a series of CR domain swaps in the contexts of SogCR4 only, Supersog1, or SogCR1,2 constructs. Analysis of the activities of these chimeric molecules suggests that CRs are important for determining the level of activity and that surrounding amino acids are the chief determinants of the type of activity exerted by different forms of Sog. These results reinforce the view that Sog is a multifunctional modulator of BMP activity and focus attention on non-CR sequences as determinants of specificity in BMP recognition.
| MATERIALS AND METHODS |
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Fly stocks:
Several independent lines of each pUAS construct were obtained by P-element-mediated germline transformation. The MS1096-GAL4 driver is ubiquitously expressed in the wing, but is expressed more strongly on the dorsal surface of the wing primordium during larval stages and becomes restricted to the dorsal surface during pupal stages (![]()
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Generation of mutant sog constructs:
cDNAs encoding the full coding regions of sog, chordin (![]()
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Mounting fly wings:
Wings from adult flies were dissected in isopropanol and mounted in Canadian Balsam mounting medium.
In situ hybridization to whole-mount embryos or discs:
In situ hybridization to whole-mount embryos and wing imaginal discs was performed with digoxigenin-labeled RNA probes (visualized as a blue alkaline phosphatase precipitate; ![]()
Microinjection of Xenopus embryos:
RNA was prepared using the mMessage mMachine kit (Ambion, Austin, TX) according to the manufacturer's protocol. RNA was injected once subequatorially on the ventral side of the embryo at the two- to four-cell stage. All RNAs were produced from CS2-derived vectors (![]()
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| RESULTS |
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The Sog CR1, CR2, and CR3 domains are individually dispensable:
As a first step in analyzing the roles of the various CR domains of Sog and the intervening stem between CR1 and the carboxy-terminal cluster of CR2CR4 domains, we constructed a series of deleted forms of Sog lacking specific domains or combinations of domains (Fig 1). We also constructed point mutants in which the conserved tryptophan residues between the first two cysteines of the CRs were changed individually or in combination to alanine (Fig 1). To determine whether the various CR domains were individually required for Sog activity, we assayed the function of Sog mutants lacking each of the four CR domains (Fig 1) in blastoderm stage embryos (Fig 2) and adult wings (Fig 1 and Fig 3). In the blastoderm embryo, we drove expression of the various UAS-sog mutant transgenes, using a hybrid GAL4/GCN4 transactivating protein, the mRNA for which is tethered to the anterior portion of the embryo by bicoid RNA localization signals (![]()
We also analyzed the activity of all mutant UAS-sog constructs (Fig 1) in the wing by expressing them with the ubiquitous wing GAL4 driver MS1096 during late larval and pupal stages (Fig 3). In the wing it is possible to distinguish three distinct requirements for BMP signaling: growth of the imaginal disc, patterning of the A/P axis, and vein development (![]()
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CR1, Sog
CR2 (Fig 3C), and Sog
CR3 although the Sog
CR3 phenotype was consistently weaker than that generated by misexpression of intact Sog (Fig 1). In addition, compound mutants lacking CR1 and the stem region (e.g., Sog
CR1,stem), CR1 through CR2 (e.g., SogCR3,4), or CR1 through CR3 (e.g., SogCR4; Fig 3E) had Sog-like activity in this assay (albeit the latter two constructs had reduced activity relative to intact Sog; Fig 3B), indicating that a single CR domain (e.g., CR4) can provide much of the Sog function. Some individuals misexpressing Sog
CR4 also exhibited a mild vein-loss phenotype (data not shown); however, others had ectopic veins (Fig 3D). This latter novel extra vein phenotype is discussed further below. These data indicate that any single CR domain is dispensable for the BMP inhibitory activity of intact Sog, although in the case of Sog
CR4, a conflicting gain-of-function activity partly obscures the underlying inhibitory Sog function.
Sog mutants in which each or all conserved tryptophan residues (Fig 3G) were mutated to alanine also caused vein-loss phenotypes similar to, although somewhat weaker than, those observed with intact Sog when misexpressed in the wing. This result indicates that the conserved tryptophan residues are dispensable for the Sog activity responsible for vein suppression. Similarly, individual W
A mutants had a Sog-like activity in the embryo when driven with the bcd-GAL4/GCN4 driver, although the quadruple W
A mutant had greatly reduced activity (Fig 2E).
Another question we addressed was whether there is functional significance to the fact that Sog has type II secretory signal located 56 amino acids from the amino terminus (![]()
Conserved CR tryptophan residues and the stem region are required for the Sog-Tsg interaction:
A variety of evidence indicates that Tsg, which plays a necessary role in dorsal-ventral patterning in the embryo (![]()
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To identify potentially critical residues in Sog required for the interaction with Tsg, we misexpressed the collection of various Sog mutants with Tsg in the wing (Fig 1). In these experiments two types of Sog mutants exhibited compromised interactions with Tsg. The first of these mutants (Sog-A1,2,3,4), which is mutated at all four conserved tryptophan residues, generates a much weaker wing phenotype in combination with Tsg (Fig 4E) than the Supersog-like phenotype caused by coexpression of intact Sog with Tsg (Fig 4B). The Sog-A1,2,3,4 + Tsg coexpression phenotype (Fig 4E) is, however, somewhat stronger than that caused by Sog-A1,2,3,4 (Fig 3G) or intact Sog alone (Fig 3B), indicating that there is a residual interaction between Sog-A1,2,3,4 and Tsg. Since each of the single Sog W
A mutants fully retained their ability to synergize with Tsg (Fig 1), it is likely that several or all of the conserved tryptophan residues in the CRs are involved in mediating the effect of Tsg. The second class of mutants that fails to interact with Tsg lacks the stem sequences between CR1 and CR2. For example, Sog
CR1, stem, which lacks both CR1 and the stem portion of Sog (or any other mutant lacking the stem region), fails entirely to interact with Tsg as revealed by the indistinguishable wing phenotypes resulting from misexpression of Tsg + Sog
CR1,stem (Fig 4F) or Tsg alone (Fig 4A). Since the Sog-A1 and Sog
CR1 mutants synergize fully with Tsg, it is likely that failure of Sog
CR1,stem to interact reflects a role of the stem region in this process.
We also found that coexpression of Supersog and Tsg generates an enhanced phenotype relative to that produced by a single copy of Supersog alone (Fig 1). Curiously, the interaction between Supersog and Tsg is also observed when the single remaining conserved tryptophan in Supersog is mutated to alanine (Supersog1-A1, Fig 1). This moderate genetic interaction may be mediated indirectly, however, since we observe a similar degree of interaction between Tsg and the non-Drosophila vertebrate antagonist Noggin (data not shown).
Deletion of the CR3 and CR4 domains creates a novel Sog activity:
As mentioned above, ubiquitous expression of a Sog mutant lacking the CR4 domain (Sog
CR4) results in a novel ectopic vein phenotype (Fig 3D). This ectopic Sog
CR4 phenotype is relatively mild and sometimes coexists with the typical vein-loss pattern caused by misexpression of intact Sog (data not shown). The complex and variable Sog
CR4 phenotype may reflect the sum of a vein-loss phenotype (e.g., as caused by intact Sog) and a novel extra-vein phenotype. Consistent with this possibility, removal of both CR3 and CR4 (SogCR1,2) induces a more extensive and penetrant ectopic vein phenotype without any vein loss (Fig 3F). It is possible that the stronger ectopic vein phenotype associated with SogCR1,2 overcomes a weaker Sog-like vein-loss phenotype. Alternatively, removal of both the CR3 and CR4 domains may severely reduce or eliminate the vein-inhibiting activity associated with intact Sog.
The ectopic vein phenotypes caused by misexpressing Sog
CR4 or SogCR1,2 are similar to those caused by hyperactive EGF-R (![]()
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CR4 or SogCR1,2 by misexpressing these mutant forms of Sog during larval and pupal wing development and assaying the expression of various markers, including Dpp target genes (e.g., spalt and omb), vein markers (e.g., kni, abrupt, rhomboid or rho, Delta, and caupolican), and intervein markers (e.g., blistered or bs equals DSRF and vn). Consistent with the severity of their final ectopic wing vein phenotypes, Sog
CR4 and SogCR1,2 have similar effects on marker gene expression, with SogCR1,2 being the stronger of the two (data not shown). For comparison, we also examined gene expression patterns in discs misexpressing Sog, Supersog, BMP ligands, and dominant-negative or activated forms of BMP receptors and epidermal growth factor (EGF) receptors. Two primary conclusions can be drawn from this analysis. First, the activity of Sog
CR4 and SogCR1,2 differs from that of either intact Sog or Supersog. For example, misexpression of SogCR1,2 in third instar wing discs has no effect on expression of A/P patterning genes, but leads to ectopic expression of the vein-promoting gene rho (Fig 5C, compare to 5A) and downregulation of the vein-suppressing genes bs (Fig 5D, compare to 5B) and Delta (data not shown). In contrast, misexpression of intact Sog has no effect on expression of any positional or vein/intervein marker during larval stages, while misexpression of Supersog1 both inhibits expression of Dpp target genes (![]()
We also examined the effect of expressing Sog
CR4 and SogCR1,2 in pupal wings when the vein vs. intervein cell fate choice is finalized. We observed significant ectopic expression of the rhomboid (rho) gene (Fig 5G), which we have previously shown is a good marker for Dpp activity. BMP signaling efficiently activates expression of rho, whereas activation of the EGF-R pathway induces significant ectopic dpp expression, but only very weak ectopic rho expression (![]()
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As a final test of SogCR1,2 activity, we misexpressed UAS-sogCR1,2 in the embryo using the bcd-GCN4/GAL4 expression system described above (![]()
A positive Sog activity in embryos has also been reported by others (![]()
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CR domains and surrounding sequences determine the level and quality of Sog activities:
The results of the CR deletion experiments described above suggest that no single CR is absolutely required for the activity of intact Sog (e.g., inhibition of Scw/Gbb), although certain CRs (e.g., CR3 and CR4) seemed to be more important than others for this function. Another way we assessed the degree to which CRs vs. surrounding protein sequences contribute to the strength and quality of Sog activities is by swapping the CR domains in the context of the backbones of SogCR4, Supersog1 (SS-1), and SogCR1,2. In these experiments, the native CR domains were replaced with each of the other three possible CRs (Fig 6A and Table 2). Several independently isolated transformant lines were then misexpressed in the wing and tested for activity as single insertions or combined in doses of two and four copies to increase levels of expression (Table 2). Two major conclusions can be drawn from these experiments. First, in the great majority of cases, altering the identity of the CRs lead to loss (Fig 6D, compare to 6B; Fig 6F and Fig H, compare to Fig 3H) or vastly reduced activity relative to the parent construct. The greatly attenuated activity of these chimeric proteins is not due to synthesis of unstable or abnormally processed protein products as we have examined induced protein expression from these various constructs in vivo by immunoblotting with an anti-Sog antibody and find that all the mutant proteins tested are made at levels comparable to those of the initial Sog constructs and that these proteins are of the predicted sizes (data not shown). These observations reveal that the CR domains are not interchangeable and minimally that they play a role in determining the magnitude of activity of the various Sog forms.
The second important result of the CR swap experiments is that when a CR swap construct had activity, it was always the same as that of the original construct. For example, in the context of the Sog-CR4 swaps, replacement of CR4 with CR2 (SogCR-2) or CR3 (SogCR-3) results in SogCR4-like phenotypes when these chimeric constructs are expressed in multiple copies (Fig 6E and Table 2). Likewise, constructs in which the CR1 domain of Supersog was substituted with CR3 or CR4 cause modest (Fig 6G, SS-3) or severe (Fig 6I, SS-4) Supersog-like phenotypes when expressed in several copies, and SogCR-4,2 (Fig 6K) has a modest SogCR1,2-like phenotype (Fig 6J) when expressed in two copies. These observations strongly suggest that the category of activity manifested by the various Sog forms is determined chiefly by the surrounding protein sequences and not by the CR domains, which act primarily in a quantitative rather than qualitative fashion to determine activity levels. The finding that deletion of either the CR1 domain or the neighboring stem region from Supersog eliminates its activity (Fig 1) is also consistent with the view that CR domains must interact with adjacent sequences to create a BMP inhibitory activity.
| DISCUSSION |
|---|
In this study we examined the contribution of different Sog domains to three distinct activities of Sog: intact Sog, which selectively blocks signaling mediated by the BMP ligands Scw/Gbb; Supersog, which acts a broader spectrum BMP inhibitor; and SogCR1,2, which has a distinct potentially positive BMP-promoting activity. Analysis of deletion and point mutation sog constructs as well as CR domain swaps indicates that both the CR domains and surrounding sequences participate in defining the various distinct activities of Sog. The CR domains function in a partially redundant fashion to determine the activity level of different Sog forms, while the surrounding sequences appear to be the chief determinants of the type of Sog activity. These studies reinforce and extend the previous view of Sog as a multifunction modulator of BMP signaling and suggest that future studies should explore the mechanism by which CR domains modify the conformation of adjacent protein sequences to interact with particular BMP targets.
CR tryptophan residues and the stem region are required for Tsg to modify Sog activity:
The Sog CR domains are defined by a set of 10 cysteine residues with a conserved spacing and a single tryptophan residue located between the first two cysteines. We explored the function of the tryptophan residues by mutating them individually or all to alanine. The finding that all four single W
A mutants have wild-type Sog function as assayed by misexpression in the wing, alone or when coexpressed with Tsg, indicates that none of these residues is individually essential for either Sog or Tsg + Sog (Supersog) activities. This finding is also consistent with the results of deleting the individual CR domains (see below). When all four tryptophans were mutated to alanine, however, we found that the Sog-like activity remained relatively unaffected but that this mutant was greatly compromised in its ability to interact with Tsg to generate a Supersog-like activity. These results suggest that the tryptophan residues in two or more CRs can mediate functional interaction with Tsg and that Sog residues outside of the four conserved tryptophans are not sufficient on their own to mediate this interaction. On the other hand, deletion of the stem region also eliminates the functional Tsg interaction since a mutant lacking the stem and CR1 fails to interact with Tsg while a mutant lacking just CR1 interacts fully. The requirement for the stem region in interacting with Tsg is consistent with both CR and stem sequences being essential for Supersog activity (Fig 1).
SogCR1,2 has a different activity than intact Sog or Supersog:
Truncated forms of Sog consisting of CR1, the stem, and CR2 behave differently than either Sog or Supersog constructs when misexpressed in the wing or embryo. The strongest form of this novel Sog activity is observed when both CR3 and CR4 are deleted (e.g., SogCR1,2). Several lines of evidence suggest that Sog CR1,2 functions by promoting BMP signaling. First, the effect of misexpressing SogCR1,2 on gene expression in wing discs is most similar to that of misexpressing an activated Sax receptor or the putative Sax ligand Gbb. This profile of gene response is quite distinct from that resulting from misexpression of activated or dominant-negative forms of the BMP receptor or EGF-receptor pathway, which is the other major signaling system regulating early vein development. Second, misexpression of SogCR1,2 in pupal wings by heat shock results in significant ectopic expression of the rho gene, which is a good measure of BMP vs. EGF-R pathway activation during this stage. Finally, expression of SogCR1,2 in the early embryo broadens the dorsal expression domain of the BMP target gene zen.
One attractive model for a positive function of Sog such as that potentially mediated by SogCR1,2 is that in addition to binding to BMPs and preventing them from gaining access to the receptors, Sog might also act as a carrier of BMPs to either protect them from degradation or possibly transport them dorsally (![]()
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An important question is whether truncated forms of Sog similar to SogCR1,2 or Sog
CR4 are generated and function in vivo. It is known that Tld can cleave Sog in vitro to generate products of approximately the same size as these constructs (![]()
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CR domains determine the level and adjacent sequences determine the type of Sog activity:
Analysis of Sog mutants in which individual CRs are deleted or single conserved tryptophan residues are mutated to alanine suggested that the CR domains perform partially overlapping functions since none of them is absolutely essential for intact Sog activity (e.g., inhibition of Gbb/Scw) or for interaction with Tsg to create a Dpp inhibitory activity. Nonetheless, these experiments also suggested that the CR domains are not equivalent. For example, deletion of CR3 or CR4 had much greater effects in reducing the SOG-like activity than did deletion of CR1 or CR2. Moreover, the fact that Supersog, which contains only CR1, can inhibit Dpp while SogCR4 apparently interferes selectively with Gbb, suggested that CR1 might bind Dpp while CR4 bound Gbb. The results of the CR swap experiments performed in the contexts of SogCR4, Supersog1, and SogCR1,2 are quite informative in resolving this question and provide a surprising answer, namely that sequences adjacent to CR domains are the primary determinants of BMP specificity.
While replacing a CR domain in swap constructs typically resulted in greatly reduced activity or inactivity of UAS-transgenes tested as single- or multicopy insertions, those that had activity generated phenotypes similar to those of the parent constructs. These data suggest that the CRs are required in a context-specific fashion to boost the activity levels of the various forms of Sog. These findings, although limited in scope, suggest that the primary determinant of the quality of Sog activity lies within the sequences surrounding the CRs rather than within the CR domains themselves. These non-CR sequences may correspond to identified repetitive motifs such as the SR repeats (![]()
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| ACKNOWLEDGMENTS |
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We thank members of the Bier lab for helpful comments on the manuscript. This work was supported by National Institutes of Health grant R01 NS29870.
Manuscript received November 3, 2003; Accepted for publication December 11, 2003.
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Sog, reduced sog-like activity; Supersog, compression of the A/P axis in which there is partial or complete fusion of L2/L3 and L4/L5, significant vein loss, and modest reduction in overall wing size (
, ectopic veins anterior to L3 and posterior to L4 (



