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The git5 Gß and git11 G
Form an Atypical Gß
Dimer Acting in the Fission Yeast Glucose/cAMP Pathway
Sheila Landrya and
Charles S. Hoffmana
a Department of Biology, Boston College, Chestnut Hill, Massachusetts 02467
Corresponding author: Charles S. Hoffman, Boston College, Biology Department, Higgins Hall 401B, Chestnut Hill, MA 02467., hoffmacs{at}bc.edu (E-mail)
| ABSTRACT |
|---|
Fission yeast adenylate cyclase, like mammalian adenylate cyclases, is regulated by a heterotrimeric G protein. The gpa2 G
and git5 Gß are both required for glucose-triggered cAMP signaling. The git5 Gß is a unique member of the Gß family in that it lacks an amino-terminal coiled-coil domain shown to be essential for mammalian Gß folding and interaction with G
subunits. Using a git5 bait in a two-hybrid screen, we identified the git11 G
gene. Co-immunoprecipitation studies confirm the composition of this Gß
dimer. Cells deleted for git11 are defective in glucose repression of both fbp1 transcription and sexual development, resembling cells lacking either the gpa2 G
or the git5 Gß. Overexpression of the gpa2 G
partially suppresses loss of either the git5 Gß or the git11 G
, while mutational activation of the G
fully suppresses loss of either Gß or G
. Deletion of gpa2 (G
), git5 (Gß), or git11 (G
) confer quantitatively distinct effects on fbp1 repression, indicating that the gpa2 G
subunit remains partially active in the absence of the Gß
dimer and that the git5 Gß subunit remains partially active in the absence of the git11 G
subunit. The addition of the CAAX box from the git11 G
to the carboxy-terminus of the git5 Gß partially suppresses the loss of the G
. Thus the G
in this system is presumably required for localization of the Gß
dimer but not for folding of the Gß subunit. In mammalian cells, the essential roles of the Gß amino-terminal coiled-coil domains and G
partners in Gß folding may therefore reflect a mechanism used by cells that express multiple forms of both Gß and G
subunits to regulate the composition and activity of its G proteins.
HETEROTRIMERIC G proteins, consisting of
, ß, and
subunits, relay external signals detected by ligand-activated seven-transmembrane receptors to a variety of effector molecules in eukaryotic cells (![]()
![]()
subunit is associated with the Gß
dimer to form the heterotrimer. Upon ligand binding, the receptor stimulates GDP release from G
, allowing G
to subsequently bind GTP. This nucleotide exchange activates the G protein by triggering a conformational change in G
and its dissociation from the Gß
dimer. In the activated state, the G
subunit and the Gß
dimer are free to regulate the activity of downstream effectors including adenylate cyclase, phospholipase C, mitogen-activated protein kinase (MAPK) cascades, and ion channels (![]()
![]()
Genetic studies and genomic sequencing of the budding yeast Saccharomyces cerevisiae and the fission yeast Schizosaccharomyces pombe show that both organisms possess two G
genes, but only one Gß gene. Due to the small size and weak conservation of G
subunits, it is harder to identify the G
genes in silico. In S. cerevisiae, the Gpa1 G
, Ste4 Gß, and Ste18 G
regulate the pheromone response pathway (![]()
![]()
dimer activating a MAPK pathway (![]()
, in conjunction with the G-protein-coupled receptor-like protein Gpr1, monitors glucose to activate adenylate cyclase (![]()
![]()
![]()
![]()
acting in this signaling pathway. In S. pombe, the gpa1 G
is a positive regulator of the pheromone response pathway (![]()
, although one study erroneously concluded that the git5/gpb1 Gß is a negative regulator of gpa1 (![]()
, in concert with the git5/gbp1 Gß and the G-protein-coupled receptor-like protein git3, activate adenylate cyclase in a glucose monitoring pathway (![]()
![]()
![]()
![]()
The S. pombe gpa2 gene was also identified as git8 (git, glucose insensitive transcription) in a mutant screen for git genes required for glucose repression of transcription of the fbp1 gene that encodes the gluconeogenic enzyme fructose-1,6-bisphosphatase (![]()
![]()
![]()
![]()
![]()
![]()
![]()
![]()
![]()
![]()
Gß subunits comprise a highly conserved protein family whose structure includes an amino-terminal coiled-coil followed by a seven-bladed WD repeat ß-barrel (Fig 1; ![]()
![]()
43% identical to members of the Gß family, it lacks the amino-terminal coiled-coil domain that includes 15 residues shown to form contacts with the G
subunit in the mammalian Gß
dimer (Fig 1; ![]()
![]()
dimer (![]()
![]()
![]()
![]()
![]()
![]()
|
To test whether the S. pombe git5 Gß interacts with a G
subunit, we conducted a two-hybrid screen to identify S. pombe proteins that physically interact with git5. One clone obtained from this screen encodes a recognizable G
subunit possessing several lysine residues and a CAAX-box (![]()
gene. These results identify git11 as the functional G
partner of git5; thus the git5 Gß does not require an amino-terminal coiled-coil to assemble into a functional Gß
dimer.
Additional characterization of the roles of the G
, Gß, and G
subunits in glucose repression of fbp1 transcription suggests that the git5-git11 Gß
dimer is required for activation of the gpa2 G
subunit and that, contrary to the data from mammalian studies, the git5 Gß retains some function in the absence of a G
partner. Thus, the dependence upon the Gß amino-terminal coiled-coil and the G
subunit for proper folding of mammalian Gß subunits (![]()
![]()
![]()
subunits to tightly control the repertoire and activity of Gß
dimers.
| MATERIALS AND METHODS |
|---|
S. pombe strains and growth media:
S. pombe strains used in this study are listed in Table 1. The fbp1::ura4+ and ura4::fbp1-lacZ reporters have been previously described (![]()
![]()
![]()
![]()
|
Recombinant DNA methodology:
All DNA manipulations were performed, unless otherwise stated, using reagents and protocols from New England Biolabs (Beverly, MA). Escherichia coli transformations were done using XL1-Blue electroporation competent cells (Stratagene, La Jolla, CA). The Expand High Fidelity PCR system (Roche Molecular Biochemicals, Indianapolis) was used for PCR reactions, according to the manufacturer's instructions. Oligonucleotides were obtained from Integrated DNA Technologies (Coralville, IA). S. pombe plasmid transformations were performed by overnight incubation in a polyethylene glycol-LiOAc-TE buffer as previously described (![]()
Two-hybrid screening:
A two-hybrid screen was carried out to identify proteins that interact with the git5 Gß. The git5 bait was PCR amplified from pSL11 (![]()
![]()
3.5 x 105 transformants, 81 His+ candidates were screened for ß-galactosidase activity by Xgal filter lift assay (![]()
![]()
![]()
Construction of functional git11 clones:
Functional clones of the git11 gene were constructed as follows. Plasmid pSL24, expressing an HA-tagged form of git11 on a URA3+-based vector, was created by PCR amplifying git11 from plasmid pSL20 using oligonucleotides git11-HA-for 5' CTACTAGCTAGCATGGAAACAGAGGCTTTATTGAATG 3' (that restores the START codon) and git11-HA-rev 5' CGGGGTACCTTAGGAAATAGTACAGCATTTGGTAGTGGC 3'. The PCR product was gel purified, digested with NheI and KpnI, and ligated with NheI- and KpnI-treated plasmid pALU (![]()
![]()
git5 plasmid constructions:
Three plasmids expressing git5 Gß derivatives from the S. pombe nmt41 promoter were constructed by the insertion of PCR products into the pNMT41-TOPO vector (Invitrogen, Carlsbad, CA) according to the manufacturer's instructions. KpnI-linearized plasmid pSL12 (![]()
![]()
protein, was generated using primers git5-for-topo 5' ATGGATTCTGGGTCAAGAGTA 3' and git5-CAAX-rev 5' TTAGGAAATAGTACAGCATTTGGTAGTGGCCCCTGACGAAGACCAGAGAC-3'.
Deletion of the git11 gene:
Strains deleted for the git11 gene were constructed using the PCR-based gene targeting method of ![]()
![]()
Multicopy suppression analyses:
S. pombe strains FWP72 (wild type), CHP439 (gpa2
), CP477 (git5
), and SLP17 (git11
) were transformed to Leu+ with plasmids expressing gpa2 (pRW7; expressing a myc-gpa2 fusion, R. M. WELTON and C. S. HOFFMAN, unpublished results), git5 (pSL26; a derivative of pSL11, ![]()
![]()
![]()
Mating assays:
Homothallic (h90) strains CHP362 (wild type), CHP481 (gpa2
), CHP486 (git5
), CHP558 (git2
), and SLP44 (git11
) were grown to exponential phase in PM liquid medium (at 37° to inhibit conjugation) and diluted to 106 cells/ml in PM liquid medium with or without 5 mM cAMP. Cultures were incubated 30 hr at 30° without shaking and photographed.
Co-immunoprecipitation studies:
S. pombe strain CHP463 (git5
) was cotransformed to Leu+, Ura+ with either plasmids pSL28 (git5-V5) and pSL24 (HA-git11), pSL28 (git5-V5) and pALU (empty vector control), or pNMT41-TOPO (empty vector control) and pSL24 (HA-git11). Cultures were grown to exponential phase in PM-ura-leu (0.1% glucose, 3% glycerol), harvested, washed twice with chilled distilled water, and resuspended at a concentration of 1000:1 in chilled lysis buffer [50 mM HEPES, pH 7.6, 150 mM NaCl, 0.5% Triton X-100, 1 mM dithiothreitol, 2 mM phenylmethylsulfonyl fluoride, and Complete Protease Inhibitor Cocktail (Roche Molecular Biochemicals)]. Cell lysates were made by glass bead lysis, vortexing five times in a mini-beadbeater (BioSpec Products, Bartlesville, OK) at 4° for 1 min at maximum speed with 1-min intervals on ice. Protein extracts were clarified and quantitated with the bicinchonic acid (BCA) kit (Pierce Chemical Co., Rockford, IL). Co-immunoprecipitations were performed as described by ![]()
-HA (Roche Molecular Biochemicals) for 2 hr followed by the addition of Protein A beads for 1.5 hr. Whole-cell extracts and
-HA precipitated proteins were resolved on a 15% SDS polyacrylamide gel and transferred to Immobilon P (Millipore Corp., Bedford, MA). The filter was probed with HRP-conjugated
-HA (Roche Molecular Biochemicals) and HRP-conjugated
-V5 (Invitrogen) antibodies and visualized with HRP-conjugated goat
-mouse antibody and LumiGlo Chemiluminescent Substrate Kit (Kirkegaard & Perry Laboratories, Gaithersburg, MD).
| RESULTS |
|---|
A two-hybrid screen identifies a potential G
partner for the git5 Gß:
To investigate whether the git5 Gß interacts with a G
partner, we conducted a two-hybrid screen for S. pombe genes whose products physically interact with git5. The bait in the screen was the S. cerevisiae GBD fused to the 305-residue git5 protein. Candidate plasmids from the S. pombe two-hybrid library, whose products interact with git5, trigger the expression of HIS3 and lacZ reporter genes in the host strain YRG-2, resulting in His+ (3AT-resistant) growth and the production of ß-galactosidase that causes colonies to stain blue in an Xgal filter lift. Plasmid pSL20, identified in this screen, displays a bait-specific interaction (Fig 2A), as indicated by the fact that only the combinations of the GBD-git5 bait and the pSL20-encoded GAD-git11 prey, or the control GBD-Snf1 bait and GAD-Snf4 prey (![]()
|
DNA sequence analysis of the insert in pSL20 reveals a 71-codon open reading frame whose product bears key signatures of a G
subunit. This gene is present on cosmid c215 (accession no. AL033534; open reading frame 4) from the S. pombe genome database (http://www.sanger.ac.uk/Projects/S_pombe/index.shtml), which carries a portion of chromosome 2. The sequence of the pSL20 cDNA insert, identical to base pairs 6367 to 6419 and 6509 to 7006 of cosmid c215, confirms the predicted splice junction. The genomic sequence indicates that only the start codon of this gene, designated git11, is missing from the cDNA clone. The 72-amino-acid git11 protein (accession no. CAA22118) is similar in length to mammalian G
subunits and resembles the human G
1 and G
4 subunits (Fig 2B). Critical features shared by these proteins include lysine residues in the carboxy-terminal region of the proteins and a carboxy-terminal CAAX box, the site of prenylation needed to associate the Gß
dimer with the peripheral membrane (![]()
partner to the git5 Gß.
Co-immunopreciptation of git5 Gß and git11 G
:
We confirmed that the git5 and git11 proteins physically interact in S. pombe by co-immunoprecipitation. Protein extracts from cells expressing either a functional git5-V5 tagged Gß, a functional HA-git11 tagged G
, or both tagged proteins were subjected to immunoprecipitation using anti-HA antibody. The precipitated proteins were examined by Western blot analysis for the presence of the git5-V5 Gß (see MATERIALS AND METHODS). Immunoblotting to detect the git5-V5 (Fig 3, top) or HA-git11 (Fig 3, bottom) proteins in whole-cell extracts revealed that the relative amount of git5-V5 was reduced in cells not overexpressing HA-git11 [ Fig 3, lanes 1 and 2; the host strain carries a git5 deletion while transcription of the endogenous git11 gene is very low (data not shown) compared to that of the adh-driven HA-git11 construct]. More importantly, the git5-V5 protein was detected only in the precipitated material from the extract from cells expressing HA-git11 (Fig 3, lanes 46). A similar interaction was seen using HA-git11 together with a git5-GFP tagged protein expressed from the git5 locus (data not shown). The git5-V5 tagged Gß expressed from plasmid pSL28 contains only the 305-codon git5 open reading frame fused to sequences encoding the V5 tag (![]()
in vivo.
|
Deletion of the git11 gene confers phenotypes associated with defects in the glucose/cAMP pathway:
To test whether the putative git11 G
acts in the glucose/cAMP pathway, we constructed git11
deletion strains and characterized them with regard to transcriptional regulation of the glucose-repressed fbp1 gene and regulation of conjugation and sporulation. Deletion of the git11 gene from strain FWP72 to create strain SLP17 causes a significant increase in ß-galactosidase expression from an integrated fbp1-lacZ reporter (![]()
) cells also display increased expression of an integrated fbp1-ura4+ reporter resulting in Ura+ and 5-FOA-sensitive growth similar to that of gpa2
and git5
strains, while FWP72 (git+) cells are Ura- and 5-FOA resistant due to glucose repression of transcription from the fbp1 promoter (Fig 4; see empty vector control transformants). These growth phenotypes represent the criteria on which the original collection of git mutants, including gpa2/git8 and git5 mutants, was identified (![]()
![]()
![]()
) cells possess wild-type basal levels of intracellular cAMP but fail to increase intracellular cAMP in response to glucose (data not shown).
|
|
|
The git11
allele was introduced into a homothallic (h90) strain to determine the effect of this deletion on the regulation of sexual development. Homothallic strains undergo mating-type switching to produce mating partners in a purified population. Wild-type cells growing in a nutrient-rich medium show little or no mating (Fig 5), whereas strains defective in glucose signaling due to the loss of gpa2 (G
), git5 (Gß), or git2 (adenylate cyclase) readily mate and sporulate to produce asci (Fig 5; ![]()
![]()
![]()
cells also display starvation-independent sexual development. This unregulated conjugation and sporulation is suppressed in all four mutant strains by the addition of 5 mM cAMP to the growth medium (Fig 5), indicating that the defect in these mutant strains is in cAMP signaling.
|
The git5 Gß and git11 G
genes display the same genetic relationship to the gpa2 gene:
We previously showed that multicopy gpa2+ partially suppresses a mutation or deletion of the git5 Gß gene, while multicopy git5+ has no effect on a gpa2 deletion (![]()
![]()
subunit (Table 3; ![]()
![]()
![]()
dimer acting in the S. pombe glucose/cAMP pathway.
Deletion of the gpa2 G
, git5 Gß, and git11 G
genes produce quantitatively distinct effects on fbp1-lacZ expression:
To characterize the relative roles in cAMP signaling, we measured the effects of gpa2 (G
), git5 (Gß), and git11 (G
) deletions on fbp1-lacZ expression (Table 3). The effect of each deletion on fbp1-lacZ expression is distinguishable with the gpa2 deletion causing a 250-fold increase, the git5 deletion causing a >100-fold increase, and the git11 deletion causing a >30-fold increase (Table 3). These results suggest that the G
subunit remains partially active in the absence of the Gß
dimer. They also indicate that either the Gß subunit remains partially active in the absence of the G
subunit or that git11 is not the only G
partner for the git5 Gß.
To investigate whether the git5-git11 Gß
carries out any additional role in glucose monitoring other than to facilitate the activation of the gpa2 G
, we co-overexpressed git5 and git11 in gpa2 mutant strains. This overexpression failed to reduce fbp1-lacZ expression in a gpa2-60 (reduction in function allele; ![]()
![]()
dimer is to regulate G
activity.
Bypass of a git11 deletion by the addition of the git11 CAAX box to git5:
The quantitative difference between a git5 deletion (Gß) and a git11 deletion (G
; Table 2 and Table 3) indicates that either the Gß is partially active in the absence of G
or that git11 is not the only G
partner for git5. The suggestion that a Gß subunit can remain partially functional in the absence of a G
partner is unprecedented. This would imply that the Gß subunit can properly fold in the absence of G
and may require G
only for localization of Gß to the peripheral membrane. If true, the addition of a CAAX box to the git5 Gß subunit might partially or fully bypass the need for an intact git11 G
subunit. However, if there are multiple G
subunits, and Gß
dimer formation is required for function, the addition of a CAAX box to the Gß subunit would most likely inhibit dimer formation and G-protein activity. To distinguish between these two hypotheses, we fused the coding region for the carboxy-terminal nine residues from git11 to the git5 ORF and tested the ability of this construct to suppress either or both git5
and git11
deletions. The git5-CAAX chimeric protein, expressed from the nmt41 promoter on plasmid pSL29, suppressed the 5-FOAS growth (indicating a restoration of glucose repression of the fbp1-ura4 reporter gene) to strains carrying either a git5
or git11
single deletion or a git5
git11
double deletion (Fig 6). Thus the addition of the CAAX box increases the function of git5 in the absence of git11, since expression of the wild-type git5 protein from the same promoter on plasmid pSL27 only suppressed the growth defect in the git5
single deletion strain (Fig 6). A quantitative analysis of the effect of these plasmids on expression of the fbp1-lacZ reporter in these same transformants shows that the git5-CAAX protein is only partially better than wild-type git5 in restoring glucose repression to a git5
git11
double deletion strain (Table 4). However, this analysis is complicated by the fact that the git5-CAAX protein is less functional than the wild-type git5 protein in a strain that expresses a functional git11 protein (strain CHP477, Table 4).
|
|
| DISCUSSION |
|---|
The cloning and characterization of the S. pombe git11 gene suggest that its product is the G
subunit of the gpa2-git5-git11 heterotrimeric G protein responsible for adenylate cyclase activation in response to glucose detection. While git11 is a conventional G
subunit, its git5 Gß partner lacks the amino-terminal coiled-coil domain that has been suggested by both structural and functional studies to be critical to the assembly of the Gß
dimer. Our previous observation that the S. pombe git5 Gß lacks this domain (![]()
subunits appear to function in the absence of a Gß
dimer. Thus it seemed equally plausible that a heterodimeric G protein lacking a G
subunit could exist. The second paradigm is that the Gß amino-terminal coiled-coil is essential for both the folding of the Gß subunit and its assembly with G
(![]()
![]()
![]()
indicates that the WD repeat ß-barrel of the Gß subunit can be sufficient to allow Gß
dimer assembly.
The functional relationship of the G-protein subunits in the S. pombe glucose/cAMP pathway is clearly different from that of the S. cerevisiae pheromone response pathway in which the Gß
dimer activates a downstream MAPK pathway. Due to this functional relationship of the G-protein subunits in S. cerevisiae, mutations in the GPA1 G
gene confer the opposite phenotypes to those associated with mutations in the STE4 Gß gene or the STE18 G
gene (![]()
![]()
![]()
), git5 (Gß), and git11 (G
) genes function cooperatively, as evidenced by the similar defects in fbp1 transcriptional regulation (Fig 4, Table 3) and nutrient regulation of sexual development (Fig 5) observed in gpa2, git5, and git11 mutants. These results, along with the multicopy suppression studies (Table 2), indicate that the gpa2 G
is the key activator of adenylate cyclase in response to glucose detection and that the git5-git11 Gß
is a positive regulator of G
. Consistent with this model, the loss of the gpa2 G
has a greater effect on glucose repression of fbp1 transcription than does the loss of the git5 Gß or the git11 G
(Table 3). Conversely, mutational activation of gpa2 fully suppresses the loss of either git5 or git11 (Table 3). For proper glucose signaling to occur, the Gß
dimer may be required to promote an efficient interaction between the G
subunit and git3, the likely glucose receptor (![]()
in coupling of the Gpa1 G
to the Ste2 pheromone receptor (![]()
subunit has no effect on fbp1-lacZ expression in a gpa2 mutant strain, we conclude that the Gß
dimer does not have any G
-independent role in glucose monitoring.
Deletion of the git5 Gß gene confers a two- to fourfold greater increase in fbp1-lacZ expression than does the deletion of the git11 G
gene (Table 2 Table 3 Table 4); therefore it appears that the git5 Gß retains some function in the absence of its G
partner. Consistent with this suggestion, the addition of a CAAX box to the carboxy-terminus of the git5 Gß increases the function of Gß in cells lacking G
(Fig 6, Table 4). As mentioned above, this result does not support the alternative hypothesis that S. pombe expresses multiple G
subunits. Thus the git11 G
appears to act to localize the git5 Gß to the peripheral membrane but is not required for proper folding of the Gß subunit. While the git5-CAAX protein clearly bypasses the need for a git11 G
as judged by the 5-FOA growth test (Fig 6), results from ß-galactosidase assays measuring the effect of these constructs on expression of the fbp1-lacZ reporter (Table 4) are not as convincing. We have observed similar discrepancies between 5-FOA growth results and ß-galactosidase activity while studying suppression of mutations affecting the protein kinase A pathway by multicopy pyp1 (![]()
![]()
Our results stand in striking contrast to data from studies showing that mammalian Gß subunits are unable to fold in the absence of G
partners (![]()
![]()
subunit vs. ones that express multiple forms of each subunit. In mammalian cells, the requirement of the Gß amino-terminal coiled-coil for Gß
association and thus the proper folding of the Gß subunit may allow cells to tightly regulate the combinations of Gß
dimers assembled. If mammalian Gß subunits could fold into ß-barrels in the absence of G
subunits, it might reduce the stringency of the dimer interaction and allow the subsequent assembly of a broader range of Gß
dimers. Alternatively, these monomeric Gß subunits might either promote or interfere with signaling in pathways other than the ones in which they normally act. These issues do not arise in S. pombe, which expresses a single species of Gß and G
subunit. Even so, we detect lower levels of the Gß subunit in extracts from cells overexpressing the tagged git5-V5 Gß subunit alone relative to those of cells overexpressing both git5-V5 and HA-git11 G
(Fig 3, lanes 1 and 2). Thus, stability of the git5 Gß subunit may be partially dependent upon assembly of a Gß
dimer, showing that the behavior of the fission yeast Gß
is not wholly unlike that of the mammalian dimer. In the same vein, it is possible that some as yet untested mammalian Gß subunits may behave more like the git5 Gß with respect to folding in the absence of a G
partner. The continued study of the structure and function of G proteins may therefore identify a broad spectrum of structural tendencies rather than a few strictly followed rules.
| ACKNOWLEDGMENTS |
|---|
We give special thanks to Eva Neer, of blessed memory, for her advice and interest over the past several years. We thank Stephen Elledge for the S. pombe two-hybrid library and advice on screening, Tom Chappell for advice on use of the pNMT41-TOPO cloning vector, Eric Chang for plasmids pALU and pARTCM, and Rob Welton for strains and plasmids. We also thank David Burgess for the use of his microscope and Brad Shuster for advice and assistance with the microscopy. This work was supported by National Institutes of Health grant GM-46226 to C.S.H. and by a Clare Boothe Luce graduate fellowship to S.L.
Manuscript received October 23, 2000; Accepted for publication December 4, 2000.
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