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A Directed Mutagenesis Screen in Drosophila melanogaster Reveals New Mutants That Influence hedgehog Signaling
Nicola Hainesa and Marcel van den Heuvelaa MRC Functional Genetics Unit, Department of Human Anatomy and Genetics, University of Oxford, Oxford OX1 3QX, United Kingdom
Corresponding author: Marcel van den Heuvel, MRC Functional Genetics Unit, Department of Human Anatomy and Genetics, University of Oxford, S. Parks Rd., Oxford OX1 3QX, United Kingdom., marcel.vandenheuvel{at}anat.ox.ac.uk (E-mail)
Communicating editor: T. SCHÜPBACH
| ABSTRACT |
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The Hedgehog signaling pathway has been recognized as essential for patterning processes in development of metazoan animal species. The signaling pathway is, however, not entirely understood. To start to address this problem, we set out to isolate new mutations that influence Hedgehog signaling. We performed a mutagenesis screen for mutations that dominantly suppress Hedgehog overexpression phenotypes in the Drosophila melanogaster wing. We isolated four mutations that influence Hedgehog signaling. These were analyzed in the amenable wing system using genetic and molecular techniques. One of these four mutations affects the stability of the Hedgehog expression domain boundary, also known as the organizer in the developing wing. Another mutation affects a possible Hedgehog autoregulation mechanism, which stabilizes the same boundary.
MEMBERS of the Hedgehog (Hh) family of proteins are secreted intercellular signaling molecules that provide vital patterning information in a wide range of developmental contexts. Signaling by Hh proteins has been identified in patterning of the vertebrate neural tube, the somites, specification of different neuronal cells, and myotome and sclerotome differentiation. The determination of left-right asymmetry, hair follicle development, and limb morphogenesis have all been found to involve Hh signaling (for review, see ![]()
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Hh genes were cloned from vertebrate species on the basis of homology to the Drosophila hh gene (see ![]()
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As in vertebrates where Hh proteins play important roles in the development and differentiation of many tissues, the single hh gene in flies (based on latest genomic database searches) plays multiple roles. Its expression in the embryonic segment is maintained in the tissues that will form most of the adult fly. In these imaginal discs, hh plays an essential role in patterning (![]()
Although several proteins are known to function downstream of Hh, either to transduce or to inhibit the signal (![]()
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| MATERIALS AND METHODS |
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Fly strains:
A second chromosome isogenized stock was generated (cn bw sp) for the mutagenesis. All GAL4 lines (30A, 34B, and 1348) have been described (![]()
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Mutagenesis:
A total of 10,000 male flies of an isogenized cn bw sp stock were treated with 4000 rad using a Co source. After 24 hr they were mated to hhMrt/TM3 females and the F1 non-TM3 progeny were screened for reduction of the hhMrt phenotype. The suppressing loci were rescued, tested again over hhMrt, and balanced using the suppression phenotype to determine the chromosomal location. All stocks were then kept balanced or as homozygous (if viable). Regularly, the suppression phenotype was tested against either hhMrt or 30-AGAL4 UAS shh.
ß-Galactosidase stainings of imaginal discs:
Larval heads were cut off the larvae in 1x PBS. They were inverted and fixed for 6 min in 1x PBS, 0.1% glutaraldehyde. The inverted heads were washed five times with 1x PBS and incubated at 37° for 1 hr in 10 mM phosphate buffer, 3.1 mM K4(Fe[II] CN6), 3.1 mM K3(Fe[III]CN6), 150 mM NaCl, 1.0 mM MgCl2 with 0.32% X-gal (5-bromo-4-chloro-3-indolyl ß-D-galactopyranoside). The heads were washed with 1x PBS, 0.1% Tween 20, and the discs were dissected in the same buffer. The wing imaginal discs were mounted in 1x PBS, 70% glycerol on glass slides. They were photographed with a Zeiss Axioscop microscope using differential interference contrast optics.
Antibody stainings of imaginal discs:
Larval heads were cut off the larvae in 1x PBS on ice. They were inverted and fixed for 20 min in 1x PBS, 4% paraformaldehyde. The inverted heads were washed five times with 1x PBS and again washed five times for 5 min each with 1x PBS, 5% normal serum (usually donkey in case secondary antibodies were derived from donkey), and 0.3% saponin (PBT). They were incubated overnight at 4° with the primary antibodies in PBT and washed again five times with PBT. Secondary antibodies were obtained from Jackson Immunoresearch Laboratories (West Grove, PA). They were used at the manufacturer's recommended concentrations for 2 hr in PBT at room temperature, after which the heads were washed again five times with PBT. Discs were dissected from the heads in PBT and mounted in VectaShield (Vector Laboratories, Burlingame, CA) on glass slides. They were viewed using a Leica confocal laser scanning microscope.
The antibody against the Cubitus interruptus (Ci) protein originated from ![]()
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| RESULTS |
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Suppression of hhMrt phenotype:
The hhMrt allele leads to ectopic expression of the hh gene in the anterior wing compartment, where normally hh is not expressed (![]()
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Male flies were exposed to 4000 rad of radiation. These males were mated to hhMrt females and the resulting F1 progeny were studied. In total, 25,000 chromosomes were screened and 12 mutants were identified in which the hhMrt phenotype was suppressed. Seven of the mutations were stabilized and balanced to second and third chromosomes [labeled Su(hh) IVII]. These consistently suppressed the hhMrt wing phenotype. To compensate for the isolation of spurious suppressors due to the variability of the hhMrt phenotype, all isolated mutants were screened three times against the hhMrt stock; average suppressed wings are shown in Fig 1C–I.
Suppression of ectopic hh phenotypes:
In the hhMrt wing imaginal discs, hh is ectopically expressed in the anterior region of the disc. To verify that our mutants did not suppress Hh overexpression specifically in this region of the wing, all isolated mutants were crossed into a background where Hh is expressed in the disc at this and other sites. However, ectopic expression of Drosophila hh in the wing imaginal disc using transgenes leads to severe duplications and often flies do not emerge. Vertebrate Hh genes induce similar but milder duplications when overexpressed (Fig 2B). In addition, by using a vertebrate Hh gene, we reassert that the observed suppression is specific to Hh signaling.
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The seven mutants were tested using a phenotype generated by UAS-GAL4-driven expression of zebrafish sonic hh in the presumptive proximal areas of the wing (![]()
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Suppression of ectopic decapentaplegic phenotypes:
A transcriptional target of Hh signaling in the wing imaginal disc is the decapentaplegic (dpp) gene, a member of the tgfß/BMP superfamily (![]()
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The suppression of the overgrowth and repatterning phenotypes seen above could be caused by suppression of Dpp signaling rather than of Hh signaling itself. To distinguish between these possibilities we introduced the Su(hh) IVII mutants into a dpp overexpression background. In this experiment, the dpp gene is ectopically expressed using the same GAL4 driver as above (30A), leading to a mirror image duplication of tissue at the anterior and overgrowth at the posterior (Fig 3B). Suppression of the phenotype caused by dpp overexpression was observed in four mutants [Su(hh) I, II, IV, and VII; Fig 3C, Fig D, Fig F, and Fig I). The strong suppression observed in Su(hh) VII was very consistent, while in Su(hh) I, II, and IV only mild suppression was observed and sometimes it was impossible to distinguish suppressed from nonsuppressed. Three mutants did not suppress the dpp-induced phenotype [Su(hh) III, V, and VI; Fig 3E, Fig G, and Fig H].
On the basis of these and the above results, we excluded Su(hh) V and Su(hh) VI (shown in Fig 2 and Fig 3G and Fig H) from further study; these did not suppress ectopic shh nor ectopic dpp. Su(hh) VII clearly reduces the phenotype caused by ectopic dpp but the phenotypes caused by ectopic hh expression are not affected (Fig 2 and Fig 3I). As we were interested in Hh signaling, we did not pursue this mutant either. Of the four remaining mutants, Su(hh) III (Fig 2E and Fig M; Fig 3E) suppresses only ectopic hh expression. The other three [Su(hh) I, II, and IV; Fig 2 and Fig 3C, Fig D, and Fig F; Fig 2K, Fig L, and Fig N] suppress ectopic hh consistently and strongly. In addition, these three mutants [Su(hh) I, II, and IV] suppress the phenotypes caused by ectopic dpp mildly and sometimes not at all. We believe this variability might indicate that these suppressors act at the level of dpp transcriptional induction. Alternatively, it indicates that the variable suppression is due to the fact that ectopic dpp drives developmental changes in the posterior compartment (and hh using our driver does not), which might influence the observed phenotypes.
Complementation and mapping analysis:
To genetically localize the isolated mutants, we performed meiotic recombination mapping making use of the suppression of the 34BGAL4 UAS shh phenotype. Mapping of the mutants would allow us to define the mutants as possible novel genes interacting with the Hh signaling pathway or as additional alleles of previously characterized mutants in the pathway. The results of meiotic mapping of Su(hh) IIV are shown in Fig 4. In addition to the determination of the approximate map position, deficiencies covering the indicated regions were tested for suppression of the 34BGAL4 UAS shh phenotype and for genetic interactions with the isolated mutants (Fig 4).
Su(hh) I was mapped to map position 3133 and Su(hh) II to 5357. Deficiencies that fall within these regions also suppressed the 34BGAL4 UAS shh phenotype. Neither of these regions contains mutants that are thought to influence Hh signaling. Su(hh) III was mapped to the region 5960 on the right arm of the second chromosome. A deficiency covering this region (59F60A) suppresses the 34BGAL4 UAS shh phenotype. Su(hh) III is homozygous embryonic lethal and lethality is also seen in trans over the deficiency. Su(hh) III mutant embryos display a normal cuticle phenotype. In the 5960 region on the second chromosome, several interesting genes are known. One of these is the glass bottom boat (gbb) gene that encodes a dpp homologue in flies. Mutations in this gene have been shown to influence Dpp-driven wing patterning, possibly by cooperating with Dpp signaling (![]()
Su(hh) IV was mapped to map position 6869 on the left arm of the third chromosome. A deficiency in this region (68C69B) also suppresses the 34BGAL4 UAS shh phenotype. Like Su(hh) III, Su(hh) IV is homozygous lethal and no embryonic phenotype is discernible. Su(hh) IV is also lethal in trans over the 68C69B deficiency. There are no mutants known in this region that influence Hh signaling.
Influence on target gene expression:
Ectopic Hh signaling leads to induction of ectopic dpp transcription. If our suppressor mutants function in the Hh pathway, they should reduce the amount of ectopic dpp expression. Fig 5A visualizes the expression domain of the GAL4 driver we used in these experiments (30AGAL4). If 30AGAL4 is used to express the shh gene, dpp expression is induced in the areas where the driver is active in the anterior area of the wing imaginal disc, in addition to the normal expression domain in the stripe (Fig 5, BE; left vs. middle). In the posterior part of the disc (where endogenous hh is expressed), ectopic dpp is suppressed by the action of the transcriptional repressor En, coexpressed there with hh (![]()
We introduced Su(hh) IIV into the 30AGAL4 UAS shh genetic background and examined the expression of dpp using a dpplacZ transgene. Both Su(hh) I and IV reduced the amounts of ectopic dpp expression compared to the transgenic background, as expected (Fig 5B and Fig E). In Su(hh) III discs, the ectopic expression of dpp is reduced but also the normal endogenous stripe of dpp expression through the middle of the disc is reduced in intensity (Fig 5D). In Su(hh) II, the levels of ectopic dpp were increased especially in areas where 30AGAL4 expression is highest (Fig 5C).
Suppression of ectopic cubitus interruptus phenotypes:
Transcription of target genes downstream of hh signaling is elaborated through the activation of a large cytoplasmic complex (![]()
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Overexpression of the full-length ci gene leads to extreme duplication phenotypes and no flies emerge when the 30AGAL4 driver is used. We used another GAL4 driver to express ci that allows flies to emerge with a mild vein phenotype (1348GAL4; Fig 6A). We introduced the suppressor mutants into this background and analyzed the suppression of the UAS-ci phenotype. Su(hh) I did not suppress the phenotype caused by overexpression of ci (Fig 6B). Su(hh) II and III reverted the phenotype to close to wild-type vein patterning (Fig 6C and Fig D), while Su(hh) IV effected differential rescue of the phenotype with anterior compartment vein patterning being close to normal (Fig 6E).
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Further analysis of Su(hh) II and III:
Su(hh) III was analyzed further because this locus seems to suppress only Hh signaling and not Dpp signaling. In Su(hh) III/+ discs in a shh overexpression background, reduced levels of dpp expression at the anterior-posterior compartment boundary are observed (Fig 5D). In wild-type wing imaginal discs, the expression of dpp is confined to a precise stripe of cells anterior to the expression domain of hh, creating a sharp boundary between hh- and dpp-expressing cells (Fig 7A). The Hh signaling pathway is required for the expression of dpp across this boundary but is also thought to play a crucial role in the maintenance of the boundary. We were interested to see if markers of this boundary were disrupted in Su(hh) III heterozygous mutant wing imaginal discs. The expression of dpp along this boundary in anterior cells is abnormal; the normal sharp stripe is diffuse and not as much a "straight" line down the disc as in wild type (Fig 7A). However, we could only analyze this using the dpplacZ transgenic line since antibodies to Dpp protein are no longer available. As alternative markers for the boundary, we analyzed the expression of the Ci and En proteins in discs using antibodies directed against the proteins. The levels of the Ci protein are elevated in cells where the Hh pathway induces its release from the cytoplasmic complex, but the protein is absent from cells expressing hh. Lower levels of Ci protein are seen throughout the rest of the disc where hh is not expressed (![]()
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In three of the suppressor mutants analyzed, we detected a reduction in the levels of target gene expression induced by the overexpression of Hh. However, in Su(hh) II, although it clearly suppressed the overexpression phenotypes (Fig 2D), higher levels of ectopic dpp were found especially in the areas of the disc where the GAL4 expression is highest (Fig 5C). Hh signaling has been shown to lead to expression of En in anterior cells, but only in cells that are closest to the hh expression domain (![]()
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| DISCUSSION |
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We present here four mutations that influence Hh signaling. These have not been previously isolated as suppressing Hh-induced patterning and they thus represent new genes that might play a role in Hh signaling. Alternatively, some of these could be acting in pathways downstream of Hh patterning activity (i.e., the Dpp signaling pathway).
We utilized a known dominant allele of hh (hhMrt) in an extensive radiation mutagenesis screen. The combination of this hh allele and transgenes to overexpress vertebrate Hh genes increased the specificity with which the mutants could be selected for further analysis. Additional combinations of the mutants with transgenic backgrounds for genes in the Hh signaling pathway allowed a placement in the genetic hierarchy. In addition, by using vertebrate homologues for Hh overexpression, the possibility of finding evolutionarily conserved components in the Hh pathway will have increased.
We isolated one mutant, Su(hh) I, that suppressed the phenotypes caused by overexpression of hh (or shh), and this mutant suppresses the induction of ectopic target gene expression (dpp) by Hh signaling. It maps to the left arm of the second chromosome at map position 3133. No mutants that affect Hh signaling have been characterized in this region. This mutant could thus represent a new gene that functions in the Hh pathway. Interestingly, a homologue of the ptc gene can be found here in the annotated genome database (accession no. CG5722). This ptc homologue shows significant homology to the human NPC 1 gene; this gene was isolated in humans as the cause of the Nieman-Pick C1 disease (![]()
In contrast, in Su(hh) II discs, we found that the expression domain of the Hh target gene dpp expands. This locus was isolated as the strongest suppressor of Hh overexpression phenotypes; it also suppresses albeit weakly ci and dpp overexpression phenotypes. Upon further analysis of the induction of dpp in this mutant background, we found that the gain of dpp in the discs is due to a loss of ectopically induced En. We show that ectopic shh induces endogenous En expression in the anterior compartment (for references see RESULTS). In Su(hh) II discs, En expression is lost in the areas where high levels of shh ectopically induced it. En suppresses dpp expression as a transcriptional repressor (![]()
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Both Su(hh) III and IV are embryonic lethal but neither shows any distinct abnormal cuticle phenotype. If the lethality of these mutants is associated with the suppression and if these mutants are absolutely required for Hh signaling, perhaps embryonic segmentation phenotypes would be expected. The apparent lack of these might indicate a maternal contribution for the gene. This would be consistent with the fact that these loci have not been found in mutagenesis screens for zygotic embryonic phenotypes that resemble the hh phenotype. We have not generated any germline clones to remove maternal contribution since the use of radiation as a mutagen might have caused mutations in more than one gene in our mutants. A role in embryonic patterning for these mutants is thus possible but one cannot exclude an exclusive role for these genes in wing/imaginal Hh patterning.
Su(hh) III maps to a region where several loci of interest to wing patterning driven by Hh or Dpp signaling have been placed (map position 5960). We show that our mutant is not allelic to gbb, a dpp homologue in this region that has been shown to cooperate with Dpp signaling in disc patterning. Another gene situated close by is the G-protein
-subunit encoding gene (G
s). Since the Hh signaling pathway contains a putative G-protein-coupled receptor, smoothened (![]()
s either, since a combination of a deficiency covering Su(hh) III and G
s combined with a translocation containing G
s to the X chromosome still suppresses the test phenotypes. Upon further analysis of the expression of dpp in discs heterozygous mutant for Su(hh) III, we observed differences in the normal expression domain. The normally sharp boundary between the posterior and anterior compartments was less defined, leading up to (in extreme cases) a very disrupted and unclear compartment boundary. Indeed, we confirmed this observation using other markers for the boundary, Ci and En. It is known that Hh signaling is required for proper establishment of the boundary but little is known of the cell biology underlying the clonal and affinity restrictions at the boundary (![]()
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Su (hh) IV is localized on the third chromosome to map position 6869. It suppresses well the phenotypes generated by overexpression of shh. It also weakly suppresses those generated by dpp ectopic expression. One observation indicates a particular role for this locus. When ci is overexpressed to a low level overlying the boundary between hh-expressing and nonexpressing cells, rescue of the resulting phenotype is observed but only in the domain of the wing that did not express hh. This result indicates that this locus plays a role in Hh signaling at the level of Ci or directly downstream but only in anterior compartment cells since here the ci-driven phenotypes are rescued. There are no genes in this area that show homology to genes known to act in the Hh signaling pathway.
| ACKNOWLEDGMENTS |
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We acknowledge the generous contributions of Drosophila stocks by the Bloomington Stock Center, Dr. Norbert Perrimon, Dr. Jym Mohler, Dr. Andrea Brand, Dr. Kristi Wharton, and Dr. David Roberts. The antibodies against the Ci protein were a gift of Dr. R. Holmgren. We thank Dr. Philip Ingham for helping us with the original idea to use the hhMrt stock as the subject of our screen. And we thank Dr. David Roberts for useful comments on the manuscript. This work has been made possible by Biotechnology and Biological Sciences Research Council grant 43/G09234 and a Medical Research Council program grant to M.v.d.H. as part of the MRC Functional Genetics Unit.
Manuscript received June 16, 2000; Accepted for publication August 15, 2000.
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