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An Enhancer Trap Screen for Ecdysone-Inducible Genes Required for Drosophila Adult Leg Morphogenesis
Julie Gatesa and Carl S. Thummelaa Department of Human Genetics, Howard Hughes Medical Institute, University of Utah, Salt Lake City, Utah 84112-5331
Corresponding author: Carl S. Thummel, Department of Human Genetics, HHMI, University of Utah, 15 N. 2030 East, Rm. 5100, Salt Lake City, UT 84112-5331., carl.thummel{at}genetics.utah.edu (E-mail)
Communicating editor: S. HENIKOFF
| ABSTRACT |
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Although extensive studies of Drosophila imaginal disc development have focused on proliferation and patterning, relatively little is known about how the patterned imaginal discs are transformed into adult structures during metamorphosis. Studies focused primarily on leg development have shown that this remarkable transformation is coordinated by pulses of the steroid hormone ecdysone and requires the function of ecdysone-inducible transcription factors as well as proteases and components of the contractile cytoskeleton and adherens junctions. Here, we describe a genetic screen aimed at expanding our understanding of the hormonal regulation of Drosophila adult leg morphogenesis. We screened 1300 lethal P-element enhancer trap insertions on the second chromosome for a series of sequential parameters including pupal lethality, defects in leg morphogenesis, and ecdysone-induced lacZ reporter gene expression. From this screen we identified four mutations, one of which corresponds to bancal, which encodes the Drosophila homolog of hnRNP K. We also identified vulcan, which encodes a protein that shares sequence similarity with a family of rat SAPAP proteins. Both bancal and vulcan are inducible by ecdysone, thus linking the hormone signal with leg morphogenesis. This screen provides new directions for understanding the hormonal regulation of leg development during Drosophila metamorphosis.
EPITHELIAL morphogenesis is the driving force behind many of the central processes of development including gastrulation, neurulation, and organogenesis. We are studying the metamorphic development of the leg imaginal discs of Drosophila in an effort to understand the basic mechanisms that underlie epithelial morphogenesis.
Imaginal discs are small epithelial sacs that give rise to specific portions of the adult integument (epidermis and cuticle) including the adult appendages. They are formed during embryogenesis as invaginations of the embryonic ectoderm. During larval development, the imaginal discs proliferate and are spatially patterned, resulting in each cell acquiring a position and fate in the adult structure (![]()
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The late third instar leg imaginal disc consists of a concentrically folded single layer of epithelial cells. For this disc to assume the form of an adult leg it must telescope out along the proximodistal axis and constrict along its circumference. Remarkably, this dramatic morphological transformation occurs in the absence of proliferation and is driven by changes in cell shape (![]()
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Failure of the leg imaginal disc cells to change shape during prepupal development results in discs that are not fully elongated and malformed adult legs with short, thick segments (![]()
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Consistent with a role for ecdysone as a critical signal for leg morphogenesis, mutations in ecdysone-induced regulatory genes can also lead to a malformed leg phenotype. These genes include the Broad-Complex (BR-C; ![]()
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crol mutations were identified in a small scale screen of lethal P-element insertion lines that were examined for their ability to meet a series of criteria, including a prepupal or pupal lethal phase, a malformed leg mutant phenotype, and defects in ecdysone-regulated gene transcription (![]()
| MATERIALS AND METHODS |
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Fly stocks:
The second chromosome lethal P-element insertion lines used in our screen were kindly provided by the Berkeley Drosophila Genome Project (BDGP) and are available either through the Bloomington Stock Center or the BDGP (![]()
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Phenotypic characterization:
Each P-element insertion was balanced over a CyO y+ chromosome in a y w background. Animals homozygous for the P-element insertion were identified by the yellow phenotype of their mouth hooks and dentical belts. For all experiments, y w animals were used as the control. When necessary, animals were maintained on food containing 0.1% bromophenol blue and third instar larvae were staged as described (![]()
Lethal phase analysis:
The degree of embryonic lethality caused by each mutation was determined by collecting embryos from the cross yw; P(w+ or ry+)/CyO y+ x yw; P(w+ or ry+)/CyO y+. For the control, embryos were collected from the cross: yw; +/CyO y+ x yw; +/CyO y+. The total number of embryos was counted and placed at 25°. After 2 days, the number of dead embryos was counted. To determine the lethality caused by each mutation during later stages of development, embryos were collected from the above cross and allowed to hatch. Homozygous mutant first instar larvae were selected on the basis of the yellow phenotype of their mouthhooks and dentical belts and maintained at a density of 50 animals/vial on fresh yeast paste and standard culture media that had been scored. The vials were placed at 25° and the number of pupae were counted after 45 days. Any difference between the observed number of pupae and 50 was presumed to represent the number of animals that died as larvae. The remaining pupae were examined daily and the number of animals dying as prepupae, early pupae, or pharate adults was determined. Any mutant animals that eclosed were placed in fresh vials and observed until their death. The percentage of animals dying as adults refers to animals that die within 23 days of eclosing from their pupal case.
Histochemical staining for ß-galactosidase:
Staged mid-third instar larvae (-18 hr relative to puparium formation) and late third instar larvae (-4 hr relative to puparium formation) were dissected in PBS and fixed in 4% formaldehyde in PBS for 3 min. After rinsing two to three times in PBS, organs were incubated in staining solution [150 mM NaCl, 1 mM MgCl2, 3.3 mM K4(Fe[CN]6), 3.3 mM K3(Fe[CN]6), 10 mM sodium phosphate pH 7, 0.1% triton] containing a saturating amount of X-Gal for 1620 hr at 37°. The stained organs were then rinsed two to three times in PBS. Following an overnight incubation in 50% glycerol in PBS at 4°, the imaginal discs were dissected, mounted, and photographed using a Zeiss Axiophot microscope.
Organ culture:
To determine if lacZ reporter gene expression is induced by ecdysone, staged mid-third instar larvae were placed into oxygenated Grace's insect cell culture medium (GIBCO BRL, Gaithersburg, MD) and bisected. The posterior half of the larvae was discarded and the anterior half was turned inside out to expose the organs. The gut and fat body were then removed, leaving the brain and imaginal discs attached to the larval cuticle. These imaginal disc complexes were cultured in the presence of oxygen for 16 hr as described previously (![]()
Northern blot hybridizations:
RNA was isolated from staged control and homozygous mutant animals by direct phenol extraction as previously described (![]()
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| RESULTS |
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Identification of mutations in four genes required for leg morphogenesis:
Our screen focused on the second chromosome, where the BDGP had collected 1300 lethal P-element insertion lines (![]()
We initially screened for prepupal and/or pupal lethality to focus our efforts on mutations that cause defects in leg morphogenesis. To determine which lines met this criterion, vials of flies were allowed to age for 3 wk at room temperature after which the sides of the vials were examined for dead pupae. Lines that revealed
10% dead pupae were retained. Using this approach, a total of 148 lines were selected for further analysis. This collection was further refined to 37 lines by selecting stocks in which malformed adult legs could be seen through the pupal case.
We next took advantage of the lacZ reporter gene in the P-element insertion by determining whether there is a temporal correlation between lacZ expression and the late larval pulse of ecdysone. This allowed us to focus our efforts on genes that might be induced by the ecdysone pulse that triggers the initial stages of leg eversion and elongation. To determine which of the 37 lines met this criterion, imaginal discs were dissected from both mid-third instar larvae, when the ecdysone titer was low, and late third instar larvae, when the ecdysone titer peaked, and stained for lacZ expression (Fig 1). A total of 12 lines displayed a significant increase in lacZ expression at the end of larval development, and one line displayed a decrease, consistent with regulation by ecdysone.
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The analysis of lacZ expression patterns described above provides a temporal correlation between lacZ expression and ecdysone titer. While this suggests that the mutated genes are regulated by ecdysone, we wanted to verify hormonal regulation by assaying whether the expression of the mutated gene could be induced by ecdysone in cultured imaginal discs. Imaginal discs were dissected from mid-third instar larvae, cultured in the absence or presence of ecdysone for 16 hr, and stained for lacZ expression. Of the 12 lines examined, 4 revealed little or no lacZ expression in the absence of ecdysone and a high level of lacZ expression in the presence of the hormone, similar to that seen in staged animals (data not shown). Having met all of our criteria, we then characterized these 4 lines in more detail. These lines are designated l(2)05271, l(2)07022, l(2)k08305, and l(2)k10209.
Mutant animals from three out of the four lines die primarily during metamorphosis:
We first characterized the lethal phases associated with each of the four selected mutations to determine whether this would reveal earlier essential functions. To assess embryonic lethality, a collection of embryos was obtained from a cross between flies heterozygous for each P-element insertion and a CyO balancer chromosome, and the number of dead embryos was determined. Since 25% of the embryos are homozygous for the balancer chromosome and are expected to die (Table 1, control), the percentage of dead embryos observed must be significantly >25% to indicate lethality caused by the mutation. Only one of the lines, l(2)k10209, revealed a substantial amount of embryonic lethality, with 45% of the embryos dying (Table 1). The other three lines revealed little or no embryonic lethality.
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In an effort to identify later lethal phases, homozygous mutant first instar larvae were selected from each of the four lines and followed throughout development. Line l(2)k10209 revealed significant lethality during all stages examined, suggesting that the corresponding gene is required throughout development (Table 1). Line l(2)05271 displayed 16% lethality during larval development, suggesting that the corresponding gene performs some essential functions prior to metamorphosis. However, the majority of the lethality associated with this line, as well as the lethality associated with l(2)07022 and l(2)k08305, was during early pupal and pharate adult stages (Table 1). Interestingly, some homozygous mutant adult flies were able to eclose in lines l(2)05271, l(2)k08305, and l(2)k10209, but these adults died 2 to 3 days later. These mutants fall into two general classes: (1) animals with severely malformed legs that are unable to inflate their wings and (2) animals with wild-type legs and wings that are approximately the same size as control wings, but which appear broader along the anterior/posterior axis (data not shown). Because the broad wing phenotype is often associated with malformed legs (![]()
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Mutant animals display a malformed leg phenotype:
A central criterion of our screen was that the mutation results in malformed legs. This was initially scored by examining intact mutant late pupae or pharate adults. At this stage the bristles have differentiated and the cuticle has become pigmented, making the identification of the appendages unambiguous. In control animals, the legs are positioned along the ventral surface and extend to the posterior tip of the abdomen in an organized manner (Fig 2A). In contrast, the legs of mutant animals display a range of phenotypes, from failing to extend to the tip of the abdomen but remaining organized (Fig 2E) to being both short and bent (Fig 2, BD) or curved around the edge of the wing (Fig 2C and Fig D). The wings also appear to be affected in some of the mutant animals, failing to extend as far down the body as the wings of control animals (Fig 2C). The severity of this phenotype, however, is difficult to assess as the wings are highly folded at this stage. In contrast to the appendage-forming imaginal discs, the development of the imaginal histoblast nests seems unaffected as the abdomens of the mutant late pupae appear normal.
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To more carefully determine the nature of the leg phenotype, third legs were dissected from representative mutant pharate adults and examined in more detail (Fig 3). Third legs were chosen as they are almost always the most severely affected leg and, in some animals, the only legs that display a phenotype. In all cases, mutant legs contain the appropriate number of segments with the appropriate identity, but the shape of some segments is abnormal. In animals displaying the classic malformed leg phenotype, segments of the leg, especially the femur and tibia and often the basi-tarsus, are shorter and thicker than normal (![]()
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The malformed leg phenotype is first evident during prepupal development:
To determine when the malformed leg phenotype arises, we examined leg imaginal discs from mutant third instar larvae and prepupae. The overall morphology and size of late third instar mutant discs is indistinguishable from imaginal discs dissected from control animals (data not shown). Furthermore, the expression patterns of both Distal-less (![]()
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Leg elongation is complete by 6 hr after puparium formation, resulting in discs that had taken on the general shape of an adult leg (![]()
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Determination of whether the P-element insertion is responsible for the malformed leg phenotype:
P-element insertion lines can contain second-site mutations, making it necessary to establish that the phenotype observed is caused by the P insertion. Three methods can be used to demonstrate this connection: reversion of the phenotype by precise excision of the P element, free recombination to remove second-site mutations, and examination of animals heterozygous for the P element and a deficiency that spans the insertion site. Using these methods we were able to determine that two out of the four lines isolated in our screen contain second-site mutations that are responsible for both the lethality and malformed leg phenotype.
For line l(2)05271, we generated nearly 100 excision events and were unable to recover any that resulted in reversion of the malformed leg and lethal phenotypes. Furthermore, all animals heterozygous for l(2)05271 and each of six deficiencies that collectively span
1600 kb around the insertion site were viable and fertile with no obvious defects. We were able to confirm the insertion site reported by the BDGP by matching genomic DNA sequence with that flanking the l(2)05271 P element, thereby excluding the possibility that the P element was inserted outside of the reported cytogenetic interval. Taken together, these data indicate that the phenotype of l(2)05271 is not due to the P-element insertion.
For line l(2)k10209, we generated 65 excision events and were also unable to recover any that resulted in reversion of the malformed leg and lethal phenotypes. Additionally, we carried out free recombination with this line. We established seven lines for which we followed the w+ eye marker contained within the P element through three generations of single female matings to w1118 males. The seven recombined chromosomes were then placed over balancer chromosomes and animals homozygous for the P-element insertion were analyzed. In three of these lines, animals carrying a homozygous P-element insertion were viable and fertile with no obvious phenotype. These results indicate that a second-site mutation present on the original chromosome is responsible for the phenotypes associated with line l(2)-k10209. This conclusion has been recently confirmed by the BDGP (![]()
For line l(2)07022 we generated 14 excision events, none of which resulted in reversion of the malformed leg or lethal phenotypes. This is not surprising, however, as we later determined that this P element is inserted within the coding region of a gene. In addition, animals heterozygous for l(2)07022 and Df(2R)M41A4, a deficiency that spans
740 kb around the P-element insertion site, display the same phenotype as animals homozygous for l(2)07022. This indicates that the mutant phenotype is attributable to the P-element insertion in line l(2)07022.
For line l(2)k08305 we generated 65 excision events, 49 of which resulted in complete reversion of the mutant phenotype. We also examined animals heterozygous for l(2)k08305 and bancalv5, a deficiency for the region, and found that the resulting heterozygotes have severely malformed legs that resemble those seen in l(2)k08305 homozygotes. This is consistent with the P element being responsible for the mutant phenotype in line l(2)-k08305.
Identification of candidate genes disrupted by the l(2)07022 and l(2)k08305 P-element insertions:
Having determined that the P element is responsible for the mutant phenotypes in lines l(2)07022 and l(2)k08305, we set out to identify the gene nearest the insertion site in each line. First, plasmid rescue was used to obtain DNA flanking the insertion site (![]()
For line l(2)07022, a region of
400 bp from the plasmid rescue fragment was found to be identical to a family of 11 overlapping ESTs in the BDGP database. A cDNA corresponding to a representative of this EST family, LD18846, was sequenced. LD18846 was found to be 2360 bp in length and to contain a predicted open reading frame (ORF) encoding a 605-amino-acid protein (GenBank accession no.
AF275628). This ORF is not preceded by in-frame stop codons, suggesting that longer cDNAs may exist. The l(2)07022 P element is inserted within the coding region, 711 bp downstream from the putative translation start site. We have named this gene vulcan (vlc) after the Roman god who broke both his legs as he fell to earth upon being thrown from heaven by Jupiter. Vulcan is
40% identical over a region of 115 amino acids in its carboxy terminal domain to a family of rat proteins called SAPAPs (![]()
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For line l(2)k08305, a region of
140 bp from the plasmid rescue fragment was found to be 97% identical to a family of 13 overlapping ESTs in the BDGP database. A cDNA corresponding to a representative of this EST family, GM13955, was sequenced. This cDNA is 2028 bp in length and contains a predicted ORF encoding a 508-amino-acid protein (GenBank accession no.
AF275629), corresponding to the previously identified Drosophila homologue of hnRNP K, Bancal (![]()
The disrupted genes are not expressed in l(2)07022 and l(2)k08305 mutant third instar larvae:
To determine if the l(2)07022 and l(2)k08305 P-element insertions affect vlc and bl expression, respectively, we examined the transcription of these genes in homozygous mutant animals by Northern blot hybridization. Two RNA size classes, 2.7 and 3 kb in length, were detected by hybridization with a radioactive vlc probe in control late third instar larvae and newly formed prepupae (Fig 5). The levels of vlc mRNA increase in late third instar larvae, suggesting that this gene may be ecdysone inducible. In addition, there appears to be a temporal switch in the sizes of vlc mRNA, because both the 2.7- and 3-kb mRNAs are expressed in late third instar larvae while the larger mRNA predominates at puparium formation (Fig 5). Neither vlc transcript is detectable in l(2)07022 homozygous mutant animals, verifying that vlc is the gene disrupted by the P-element insertion in line l(2)07022 (Fig 5). This also suggests that line l(2)07022 is at least a strong hypomorphic allele of vlc.
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Northern blot hybrization of RNA isolated from control animals using a bl cDNA probe revealed a single mRNA of 2 kb in length (Fig 5). The temporal profile of bl transcription is also consistent with it being induced by ecdysone, showing a peak at puparium formation (Fig 5). The bl transcript is not detectable in l(2)k08305 homozygous mutant animals, demonstrating that bl is the gene mutated by the P-element insertion in this line and that the l(2)k08305 mutation is at least a strong hypomorphic allele of bl.
vulcan and bancal are rapidly induced by ecdysone in late third instar larval organs:
Both vlc and bl mRNA increase in abundance at the end of larval development, coincident with the high-titer pulse of ecdysone that triggers puparium formation (Fig 5). This expression profile suggests that these genes may be ecdysone inducible. To test this hypothesis, we examined vlc and bl transcription in late third instar larval organs that had been cultured for various times in the presence of ecdysone (Fig 6). Transcripts from both genes increase in abundance by 1530 min after ecdysone addition and continue to accumulate throughout the time course, consistent with these genes being directly induced by the hormone.
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| DISCUSSION |
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An enhancer trap screen for ecdysone-inducible genes required for adult leg morphogenesis:
Extensive studies have focused on the proliferation and patterning of imaginal discs that occur during larval development in Drosophila (![]()
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This screen identified 12 P-element insertion lines that display an increase in lacZ expression in late third instar larvae as well as pupal lethality with defects in adult leg development. In all cases, lacZ expression is low or absent in leg imaginal discs of mid-third instar larvae, but increases significantly in late third instar larvae in parallel with the high-titer ecdysone pulse that triggers puparium formation. Of these lines, four display an increase in lacZ expression in imaginal discs cultured with ecdysone. These lines were subjected to further characterization and resulted in the identification of vulcan and bancal. Consistent with the regulation of lacZ expression in the enhancer trap lines, both vlc and bl transcription increases dramatically at the onset of metamorphosis (Fig 5). In addition, induction of both genes can be detected within 1530 min after ecdysone addition, suggesting that they are directly induced by the hormone (Fig 6). These observations indicate that vlc and bl provide a direct link between the ecdysone signal and the initial steps of ecdysone-triggered leg elongation.
Our future plans include characterization of the remaining eight lines that displayed increased lacZ expression in leg imaginal discs of late third instar larvae. The regulation of lacZ expression in these lines raises the possibility that the corresponding gene might be a secondary-response target of ecdysone signaling in imaginal discs. Secondary-response genes display little or no ecdysone induction in organ culture, most likely as a result of anoxic stress associated with the culture conditions (G. LAM and C. S. THUMMEL, unpublished results). Identification of the mutated gene in these lines should provide further insights into the mechanisms by which ecdysone controls adult leg development.
Vulcan may function at the septate junction during leg morphogenesis:
One of the ecdysone-inducible genes that we identified as being required for leg disc elongation was vulcan (vlc). vlc mutants die primarily as pharate adults, with short malformed legs (Table 1, Fig 2). The femur and tibia in these mutants are shorter and thicker than wild type, and the distal tarsal segments are short and curved (Fig 2 and Fig 3).
A BLAST search with the predicted Vlc protein revealed a region of sequence similarity with a family of rat proteins called SAPAPs (also known as DAPs and GKAPs). SAPAPs were identified through their ability to interact, in a yeast two-hybrid assay, with the guanylate kinase domain of PSD-95/SAP90 (![]()
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There are three known MAGUK family members in Drosophila: discs-large (dlg; ![]()
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The Dlg protein is localized to the cytoplasmic face of the septate junction in imaginal disc cells (![]()
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Recent studies have also shown that vlc mutations can interact with mutations in the nonmuscle myosin II heavy chain gene, zipper (zip). Mutations in zip limit cell shape changes and thereby lead to defective leg elongation (![]()
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Bancal may regulate genes that direct adult leg morphogenesis:
The second ecdysone-inducible gene that we identified as required for leg disc elongation was bancal (bl). bl mutants die primarily as pupae and pharate adults, with short malformed legs (Table 1, Fig 2). The femur and tibia in these mutants are significantly shorter and thicker than wild type with a distinct kink in the femur and a short thick basi-tarsus (Fig 2 and Fig 3). Recently, ![]()
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bancal encodes the Drosophila homolog of hnRNP K. hnRNPs are RNA binding proteins that perform a wide range of functions in the cell, including splicing regulation, mRNA transport, mRNA stability, and translational silencing (![]()
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On the basis of these functions for hnRNP K in vertebrate systems, we propose that Bancal may regulate the transcription or translation of ecdysone-inducible genes required for leg morphogenesis in Drosophila. This proposal is supported by a weak genetic interaction we have observed between bl alleles and the broad1 allele of the BR-C (J. GATES and C. S. THUMMEL, unpublished results). We plan to examine BR-C mRNA and protein levels in bl mutant third instar larvae and prepupae. In addition, there is a switch in BR-C mRNA isoforms that occurs in imaginal discs at puparium formation, which may, at least in part, be regulated at the level of splicing (![]()
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The ability of hnRNP K to interact with DNA, RNA, and other proteins in the hnRNP particle has led to the proposal that this factor is involved in bridging multicomponent regulatory systems (![]()
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| ACKNOWLEDGMENTS |
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We thank T. Laverty and G. Rubin for providing the collection of P-element insertions on the second chromosome prior to publication, P. Bryant and S. Kerridge for providing mutant stocks, J. Roote for help and advice in characterizing l(2)05271, G. Panganiban for Dll antibody, T. Orenic and R. Holmgren for Ci antibody, L. von Kalm for many insightful conversations, and R. Ward and T. Kozlova for critical comments on the manuscript. J.G. is a Predoctoral Fellow and C.S.T. is an Investigator with the Howard Hughes Medical Institute.
Manuscript received June 8, 2000; Accepted for publication July 31, 2000.
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